Vivarium Worker

RQ worker executable for running simulation jobs.

vivarium_cluster_tools.psimulate.worker.vivarium_work_horse.work_horse(job_parameters)

Parameters:

job_parameters (dict) –

Return type:

DataFrame

vivarium_cluster_tools.psimulate.worker.vivarium_work_horse.setup_sim(job_parameters)

Set up a simulation context with the branch/job-specific configuration parameters.

Parameters:

job_parameters (JobParameters) –

Return type:

SimulationContext

vivarium_cluster_tools.psimulate.worker.vivarium_work_horse.do_sim_epilogue(start, end, event, exec_time, parameters)

Parameters:

• start (CounterSnapshot) –

• end (CounterSnapshot) –

• event (dict) –

• exec_time (dict) –

• parameters (JobParameters) –

Return type:

None

vivarium_cluster_tools.psimulate.worker.vivarium_work_horse.parameter_update_format(job_parameters)

Parameters:

job_parameters (JobParameters) –

Return type:

dict